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- | * Auto3DEM | + | ====== Software for analysis of data from cryo-electron microscopy ====== |
- | * IHRSR+ | + | |
- | * Chimera plugins | + | This site contains software that has been developed over the years by members at the Laboratory of Tim Baker. |
- | * Scripts | + | |
- | * Other | + | * [[auto3dem:home|Auto3DEM]]: package for semi-automated 3D image reconstruction by single particle analysis |
+ | * [[autortm:home|AutoRTM]]: automatic, on-the-fly reconstruction of icosahedral particles from a single micrograph | ||
+ | * [[localFSC|LocalFSC]]: a plugin for Chimera to estimate the resolution in selected regions of EM maps | ||
+ | * [[ihrsr|IHRSR++]]: user-friendly extension to the Iterative Helical Real Space Reconstruction (IHRSR) software. | ||
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+ | * [[http://bakerlab.ucsd.edu/programs-old.shtm|Old programs]]: software not maintained anymore. |